V3 HS-13-1 - SRA

SRX1897645: V3 HS-13-1
2 ILLUMINA (Illumina MiSeq) runs: 2.2M spots, 1.1G bases, 573.8Mb downloads

Submitted by: Health Canada

Study: Single Nucleotide Polymorphism (SNP) Variation in Foodborne Isolates After 100 Subcultures

PRJNA327110 • SRP077868 • All experiments • All runs

Single Nucleotide Polymorphism (SNP) Variation in Foodborne Isolates After 100 Subcultures. We made subcultures every 24 hours, so day 100 was actually subculture 100. For each of the 16 samples it was Day 1 and Day 100 of the a single culture. Day 100 of the *HPB2863_1 *does not have a day 100 culture since it was shown to be contaminated.

Sample: Pathogen: clinical or host-associated sample from Vibrio parahaemolyticus st. HS-13-1

SAMN05301462 • SRS1540510 • All experiments • All runs

Organism: Vibrio parahaemolyticus

Library:

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward302 reverse

Runs: 2 runs, 2.2M spots, 1.1G bases, 573.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR3743504	1,081,823	568.6M	308.6Mb	2017-01-01
SRR3743886	1,085,676	535.4M	265.2Mb	2017-01-01

ID:: 2745868

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